Original Article

MUC5B Promoter Polymorphism and Interstitial Lung Abnormalities

List of authors.
  • Gary M. Hunninghake, M.D., M.P.H.,
  • Hiroto Hatabu, M.D., Ph.D.,
  • Yuka Okajima, M.D.,
  • Wei Gao, M.S.,
  • Josée Dupuis, Ph.D.,
  • Jeanne C. Latourelle, D.Sc.,
  • Mizuki Nishino, M.D.,
  • Tetsuro Araki, M.D.,
  • Oscar E. Zazueta, M.D.,
  • Sila Kurugol, Ph.D.,
  • James C. Ross, M.S.,
  • Raúl San José Estépar, Ph.D.,
  • Elissa Murphy, M.S.,
  • Mark P. Steele, M.D.,
  • James E. Loyd, M.D.,
  • Marvin I. Schwarz, M.D.,
  • Tasha E. Fingerlin, Ph.D.,
  • Ivan O. Rosas, M.D.,
  • George R. Washko, M.D.,
  • George T. O'Connor, M.D.,
  • and David A. Schwartz, M.D.

Abstract

Background

A common promoter polymorphism (rs35705950) in MUC5B, the gene encoding mucin 5B, is associated with idiopathic pulmonary fibrosis. It is not known whether this polymorphism is associated with interstitial lung disease in the general population.

Methods

We performed a blinded assessment of interstitial lung abnormalities detected in 2633 participants in the Framingham Heart Study by means of volumetric chest computed tomography (CT). We evaluated the relationship between the abnormalities and the genotype at the rs35705950 locus.

Results

Of the 2633 chest CT scans that were evaluated, interstitial lung abnormalities were present in 177 (7%). Participants with such abnormalities were more likely to have shortness of breath and chronic cough and reduced measures of total lung and diffusion capacity, as compared with participants without such abnormalities. After adjustment for covariates, for each copy of the minor rs35705950 allele, the odds of interstitial lung abnormalities were 2.8 times greater (95% confidence interval [CI], 2.0 to 3.9; P<0.001), and the odds of definite CT evidence of pulmonary fibrosis were 6.3 times greater (95% CI, 3.1 to 12.7; P<0.001). Although the evidence of an association between the MUC5B genotype and interstitial lung abnormalities was greater among participants who were older than 50 years of age, a history of cigarette smoking did not appear to influence the association.

Conclusions

The MUC5B promoter polymorphism was found to be associated with interstitial lung disease in the general population. Although this association was more apparent in older persons, it did not appear to be influenced by cigarette smoking. (Funded by the National Institutes of Health and others; ClinicalTrials.gov number, NCT00005121.)

Introduction

Subclinical interstitial lung abnormalities are relatively common findings on imaging studies in smokers and elderly persons.1 Accumulating evidence suggests that these abnormalities may precede the development of clinically relevant pulmonary fibrosis.1-7 However, it is not known whether there is a genetic association between interstitial lung abnormalities and pulmonary fibrosis in the general population.

Recently, a single-nucleotide polymorphism (SNP) (rs35705950) in the promoter of the gene encoding mucin 5B (MUC5B) was shown to be associated with both familial interstitial pneumonia and sporadic idiopathic pulmonary fibrosis.8 In addition, the MUC5B variant was associated with increased expression of MUC5B in the lungs of controls, and MUC5B transcript levels were elevated in the lungs of patients with idiopathic pulmonary fibrosis, as compared with controls.8 The data suggest that the MUC5B variant conferring an increased risk of pulmonary fibrosis is common, since the minor allele of rs35705950 is present in approximately 20% of the European CEPH (Centre d'Etude du Polymorphisme Humain) population in the 1000 Genomes Project.9 In addition, the MUC5B variant has been observed more frequently both in patients with familial and in those with sporadic forms of pulmonary fibrosis than in adults without pulmonary fibrosis, and the presence of the variant has been associated with an increase by a factor of 8 in the risk of sporadic idiopathic pulmonary fibrosis.8

On the basis of these findings, we hypothesized that persons with the MUC5B variant in the general population would have an increased prevalence of interstitial lung disease. To test this hypothesis, we assessed chest scans obtained on volumetric computed tomography (CT) performed as part of the Framingham Heart Study. On the basis of known risk factors for pulmonary fibrosis,10 in the Multidetector Computed Tomography 2 (FHS-MDCT2) study, we additionally evaluated the relationship between the MUC5B polymorphism and interstitial lung abnormalities for a modification of effect according to age and smoking status.

Methods

Study Design

The Framingham Heart Study, which was initiated in 1948, is a longitudinal study that was originally designed to identify epidemiologic risk factors for cardiovascular disease. There are now multiple cohorts from the study with a wide range of phenotypic data.11 In our study, we evaluated data for 2764 adult men and women from the third-generation and offspring cohorts, comprising mostly non-Hispanic white participants. Research phenotypes that have been assessed in this cohort included a physical examination; measurement of spirometry and diffusion capacity of carbon monoxide, as measured on the Collins Classic Pulmonary Function Laboratory system (Ferraris Respiratory); respiratory questionnaires12,13; blood-sample collection; and volumetric, inspiratory, and thoracic chest CT, as performed with the 64-slice positron-emission tomography (PET)–CT Discovery VCT scanner (GE Healthcare).

The study was approved by the institutional review boards at Boston University and Brigham and Women's Hospital. All participants provided written informed consent, including consent for the use of their DNA in genetic studies.

Genotyping and Thoracic Chest CT Analysis

Figure 1. Figure 1. Computed Tomographic Images of Two Participants with Lung Abnormalities.

Shown are axial images (Panels A and B) and coronal images (Panels C and D) obtained from two participants in the Framingham Heart Study. Panels A and C (Participant 1) show representative features of interstitial lung abnormalities, and Panels B and D (Participant 2) show pulmonary parenchymal architectural distortion highly suggestive of a fibrotic lung disease (definite fibrosis).

Genotyping of the putative promoter polymorphism in MUC5B (rs35705950) was performed with the use of Taqman Genotyping Assays (Applied Biosystems), as described previously.8 Chest CTs were evaluated by three readers (including two chest radiologists and one pulmonologist) using a VirtualPlace workstation (AZE) and a sequential reading method, as described previously.1,7,14 (Details are provided in the Supplementary Appendix, available with the full text of this article at NEJM.org.) Interstitial lung abnormalities were defined as nondependent changes affecting more than 5% of any lung zone, including ground-glass or reticular abnormalities, diffuse centrilobular nodularity, nonemphysematous cysts, honeycombing, or traction bronchiectasis (Figure 1A and 1C). CT images showing either focal or unilateral ground-glass attenuation, focal or unilateral reticulation, or patchy ground-glass abnormality (<5% of the lung) were considered to be indeterminate. To assess the association between MUC5B genotype and pulmonary fibrosis, we created an additional subset of interstitial lung abnormalities that were limited to persons with pulmonary parenchymal architectural distortion highly suggestive of a fibrotic lung disease (definite fibrosis)15 (Figure 1B and 1D). All qualitative CT assessments and subtyping of lung abnormalities were performed by a consensus of three readers who were unaware of additional participant-specific information. Quantitative measures of total lung capacity were performed with the use of Airway Inspector (www.airwayinspector.org), an open-source tool for CT-based image quantitative analysis of the lung, as described previously.16

Statistical Analysis

All analyses accounted for familial relationships in the Framingham Heart Study with the use of generalized linear models, as described previously,17 and were adjusted for covariates including age, sex, body-mass index, and smoking behavior, as indicated. All genetic analyses were performed with the use of an additive genetic model.8 We performed interaction tests to evaluate whether age, lung-abnormality subtype, or smoking status modified the associations between the MUC5B genotype and lung abnormalities. Reported P values are two-sided, and P values of less than 0.05 were considered to indicate statistical significance.

Results

Thoracic CT Scans

Table 1. Table 1. Baseline Characteristics of the Participants, According to the Status of Interstitial Lung Abnormalities (ILA). Figure 2. Figure 2. MUC5B Genotype According to Lung Abnormality Status and Age Group.

Data from 2633 participants from the Framingham Heart Study are shown according to the MUC5B promoter genotype (35705950 G/G, G/T, or T/T), stratified by lung abnormality status and age (less than or equal to 50 years vs. >50 years). CT denotes computed tomography, FHS-MDCT2 Framingham Heart Study Multidetector Computed Tomography 2, and ILA interstitial lung abnormalities.

Of the 2764 participants, 2633 (95%) had both genotypic data and a thoracic CT available and were included in this analysis. Of the 2633 CT scans that were evaluated, 177 (7%) showed interstitial lung abnormalities, 1086 (41%) were indeterminate, and 1370 (52%) did not have lung abnormalities (Table 1 and Figure 2).18-20 Of the 1320 CT scans that were scored by at least two readers, 902 (68%) were concordant. Of the 418 discordant reads, 399 (95%) involved 1 indeterminate read, whereas a discrepancy between the presence or absence of lung abnormalities occurred in 19 participants (5%).

Lung Abnormalities and Characteristics of Participants

Baseline characteristics, along with comparisons between study participants with interstitial lung abnormalities, those with indeterminate abnormalities, and those without such abnormalities, are shown in Table 1. As compared with participants without interstitial lung abnormalities, those who were found to have such abnormalities were older, had increased exposure to tobacco smoke, and were more likely to report having a chronic cough and shortness of breath.

Although no major differences in spirometric measures were noted among the three groups, participants with interstitial lung abnormalities had reduced measures of the diffusion capacity of carbon monoxide and total lung capacity, as compared with those without such abnormalities. For example, participants with lung abnormalities were about twice as likely as those without abnormalities to report having a cough and shortness of breath. They also had relative reductions of 12% in the mean diffusion capacity of carbon monoxide and 9% in total lung capacity (with both measures as a percent of the predicted value). More than half the participants with interstitial lung abnormalities had a CT-measured total lung capacity of less than 80% of the predicted value, a finding that was consistent with a restrictive lung deficit.20

MUC5B Genotype and Lung Abnormalities

Table 2. Table 2. Association between Interstitial Lung Abnormalities and MUC5B Genotype in the Framingham Heart Study.

The minor allele frequency of the MUC5B promoter SNP (rs3570950) was 10.5%, and this SNP was in Hardy–Weinberg equilibrium in the Framingham Heart Study. The prevalence of lung-abnormality status according to genotypic category is presented in Figure 2. For each copy of the MUC5B variant, there was an increase in the percentage of the population that had interstitial lung abnormalities. In the Framingham Heart Study, there was an association between MUC5B genotype and interstitial lung abnormalities in adjusted models that accounted for familial relationships and for additional covariates (Table 2). For example, after adjustment for covariates, for each copy of the MUC5B variant, the odds of lung abnormalities were 2.8 times greater, as compared with those with the major MUC5B allele (Table 2). Of note, there was no significant association between the presence of the MUC5B variant and a scan that was indeterminate for interstitial lung abnormalities (odds ratio, 1.1; 95% confidence interval [CI], 0.9 to 1.3; P=0.44) (data not shown).

MUC5B Genotype, Lung Abnormalities, and Age

There was strong evidence that age was associated with interstitial lung abnormalities (Table 1). For example, the prevalence of interstitial lung abnormalities in participants who were 50 years of age or younger was 2%. In contrast, the prevalence of such abnormalities in study participants over the age of 50 years was 9% (Figure 2). Although there was not strong evidence that age modified the association between MUC5B and interstitial lung abnormalities (P=0.10), on the basis of these findings, we evaluated the associations between the MUC5B genotype and interstitial lung abnormalities stratified according to age. Although there was no evidence for an association between MUC5B and interstitial lung abnormalities among participants 50 years of age or younger (odds ratio, 1.1; 95% CI, 0.2 to 4.8; P=0.95), among those more than 50 years of age, for each copy of the MUC5B variant, there was more than double odds of having interstitial lung abnormalities (odds ratio, 2.5; 95% CI, 1.7 to 3.5; P<0.001).

MUC5B Genotype and Interstitial Subtype

Of the 177 participants with interstitial lung abnormalities (Figure 1), 5 were noted to have extensive calcified pleural plaques strongly suggestive of asbestos exposure (Fig. S1 in the Supplementary Appendix).21 There was no decrement in the association between the MUC5B variant and interstitial lung abnormalities after removal of the 5 participants with pleural plaques. For each copy of the MUC5B variant, participants had more than double the odds of having interstitial lung abnormalities (odds ratio, 2.7; 95% CI, 1.9 to 3.8; P<0.001). Of the 5 participants with extensive pleural plaques, 2 (40%) had at least one copy of the MUC5B variant.

Of the 177 participants with interstitial lung abnormalities, 47 (27%) could be further classified as having definite CT evidence of pulmonary fibrosis (Figure 1B and 1D). Baseline characteristics of all the participants with lung abnormalities as compared with those of patients with definite fibrosis are presented in Table S1 in the Supplementary Appendix. After adjustment for covariates, for each copy of the MUC5B variant, the odds of definite fibrosis were 6.3 times greater (Table 2). Despite these findings, there was no evidence that the association between MUC5B and interstitial lung abnormalities differed significantly between those with definite fibrosis and those without definite fibrosis (P=0.16).

MUC5B Genotype, Lung Abnormalities, and Smoking Status

Although there was no evidence that smoking status modified the association between MUC5B and interstitial lung abnormalities (P=0.86), on the basis of the known associations between smoking and such abnormalities,1,6 we evaluated the associations between the MUC5B genotype and lung abnormalities, stratified according to smoking status. For each copy of the MUC5B variant, participants who had never smoked had more than double the odds of having lung abnormalities (odds ratio, 2.4; 95% CI, 1.4 to 4.2; P=0.002); similarly, current or former smokers had more than triple the odds (odds ratio, 3.2; 95% CI, 2.0 to 4.9; P<0.001).

Discussion

In our study, the MUC5B promoter polymorphism was associated with interstitial lung abnormalities, as observed on CT scans of the lung in a general population sample. We found that such abnormalities were common and occurred in nearly 9% of this population among persons over the age of 50 years. Definite fibrosis was observed in approximately 2% of the study population over the age of 50 years. Interstitial lung abnormalities are associated with reduced lung volumes and diffusion capacity, as well as increased respiratory symptoms and the presence of the MUC5B genotype. Although the evidence for an association between the MUC5B genotype and lung abnormalities was stronger among older persons, it did not appear to be influenced by cigarette smoking.

Previously, we reported that interstitial lung abnormalities were associated with reduced total lung volume1 and reduced exercise capacity6 among smokers. This study extends these findings by showing that such abnormalities are also associated with increased respiratory symptoms, reduced total lung capacity, and reduced diffusion capacity of carbon monoxide in the general population. Our genetic-association study of interstitial lung abnormalities in the general population adds to studies of patients with familial interstitial pneumonia22 and shows that at least some component of the genetic predisposition for interstitial lung abnormalities and idiopathic pulmonary fibrosis is shared. The common association between MUC5B genotype, idiopathic pulmonary fibrosis,8 and now a phenotype in the general population that includes abnormalities on imaging, physiological abnormalities, and gas-exchange abnormalities suggests that, in at least some cases, interstitial lung abnormalities may represent an early or subclinical stage of pulmonary fibrosis. Moreover, our findings suggest that the MUC5B promoter polymorphism could be used to identify persons at risk for this condition.

Although the MUC5B genotype is associated with both idiopathic pulmonary fibrosis8 and an imaging phenotype suggestive of subclinical pulmonary fibrosis, the difference in the prevalence of these two conditions challenges us to consider the implications of these findings. To start, it is important to draw a distinction between interstitial lung abnormalities and idiopathic pulmonary fibrosis, since the latter is usually present in symptomatic patients and is specifically defined by a combination of histopathological and imaging features suggestive of advanced pulmonary parenchymal architectural remodeling.10 In contrast, interstitial lung abnormalities, by definition, are present in persons with undiagnosed (and often asymptomatic) disease and encompass imaging features suggestive of interstitial lung disease but not limited to those suggestive of advanced pulmonary parenchymal architectural remodeling. In addition, a comparison of the reported prevalence of these two conditions is intriguing. Idiopathic pulmonary fibrosis is reported to be present in approximately 0.002 to 0.04% of the general population,10,23-27 a prevalence that increases with age (e.g., ages 45 to 55 years, 0.02 to 0.04%; ≥75 years of age, 0.07 to 0.30%).24 Although the prevalence of interstitial lung abnormalities also increases with age,1 the estimates of the prevalences of interstitial lung abnormalities and definite fibrosis among participants in the Framingham Heart Study who were older than 50 years of age were 9% and 2%, respectively — rates that are both substantially greater than the rate reported for idiopathic pulmonary fibrosis.

Although we cannot definitively account for the reasons underlying these discrepancies within the context of our study, a number of explanations are possible. First, interstitial lung abnormalities may represent a range of histopathological conditions, with only some of these conditions representing an early stage of idiopathic pulmonary fibrosis. In light of this factor, it is important to note that idiopathic pulmonary fibrosis is reported to be the most common form of idiopathic interstitial pneumonia10 and interstitial lung disease in general.27 Second, idiopathic pulmonary fibrosis may be underdiagnosed or underreported. In support of this conclusion, a study from Bernalillo County, New Mexico, noted that the prevalence of interstitial lung disease was underreported on death certificates, whereas a review of 510 autopsy reports estimated that the overall prevalence of interstitial lung disease was 1.8% and that approximately half of these cases could be attributed to idiopathic pulmonary fibrosis.26 Finally, the diagnosis of idiopathic pulmonary fibrosis may come at an advanced stage of a more common, and often minimally symptomatic, pulmonary fibrosis syndrome that progresses in persons at various rates.

Our study has several limitations. First, some participants in the Framingham Heart Study with interstitial lung abnormalities could be misclassified (i.e., could have similar imaging changes because of conditions other than interstitial lung disease or pulmonary fibrosis). Although this explanation may be true for select participants, it does not explain the physiological and genetic findings we report here. We suggest that even among genetic-association studies involving rare diseases, misclassification bias could be an important factor in limiting the interpretation, since controls may not have been accurately phenotyped.

Second, although we do not have definitive evidence that age modifies the association between the MUC5B genotype and interstitial lung abnormalities, the limited evidence of a genetic association and the reduced prevalence of such abnormalities among persons 50 years of age or younger suggest that chest CT is unlikely to be useful in genetic studies of interstitial lung abnormalities in this age group.

Third, as we discussed above, the sample size of our study may limit our ability to draw definitive conclusions, particularly from interaction analyses. In considering sample size, it is important to note that this study accounts for all participants in the Framingham Heart Study in whom volumetric thoracic chest CT was performed. In addition, our comparison groups are stratified on the basis of genetic markers and our phenotypes were prospectively obtained by readers who were unaware of any genetic or patient-specific information.

Fourth, it is important to note that the Framingham Heart Study is a general population sample of adults of predominantly European descent.11 We urge caution in extrapolating our findings, particularly in relation to MUC5B genotype, to younger populations and those with different environmental exposures or genetic backgrounds, since in such groups, the reported prevalence of the minor allele of rs35705950 has been much lower.9

Finally, because of linkage-disequilibrium patterns on chromosome 11p15.5, we urge caution in interpreting the functional significance of rs35705950 until comprehensive resequencing of this genomic region has been performed and this variant can be clearly established as the causative variant.

Our study shows that interstitial lung abnormalities are present in approximately 1 in 11 persons 50 years of age or older, according to our population sample. These imaging abnormalities are linked to physiological abnormalities that are also present in patients with idiopathic pulmonary fibrosis. Moreover, the MUC5B promoter polymorphism appears to identify persons who are at particularly high risk for interstitial lung abnormalities and imaging evidence of pulmonary fibrosis, as was previously reported for patients with idiopathic pulmonary fibrosis or familial interstitial pneumonia.

Funding and Disclosures

Supported by grants from the National Institutes of Health (K08 HL092222, to Dr. Hunninghake; 5R21CA116271, to Dr. Hatabu; K25 HL104085 and R01 HL116473, to Dr. San José Estépar; and K23 HL089353, R01 HL116473, and R01 HL107246, to Dr. Washko); the National Heart, Lung, and Blood Institute (R01-HL095393, R01-HL097163, P01-HL092870, and RC2-HL101715, to Dr. Schwartz; and contract N01-HC-25195, to the Framingham Heart Study); and the Department of Veterans Affairs (1I01BX001534, to Dr. Schwartz).

Disclosure forms provided by the authors are available with the full text of this article at NEJM.org.

This article was published on May 21, 2013, at NEJM.org.

Author Affiliations

The authors' affiliations are listed in the Appendix.

Address reprint requests to Dr. Hunninghake at the Pulmonary and Critical Care Division, Brigham and Women's Hospital, 75 Francis St., Boston, MA 02115, or at or to Dr. Schwartz at the University of Colorado, 12631 E. 17th Ave., B178, Aurora, CO 80045, or at .

Appendix

The authors' affiliations are as follows: the Pulmonary and Critical Care Division (G.M.H., O.E.Z., I.O.R., G.R.W.), Center for Pulmonary Functional Imaging (H.H., Y.O., M.N., T.A.), the Department of Radiology (H.H., Y.O., M.N., T.A., R.S.J.E.), Surgical Planning Laboratory, Department of Radiology (S.K., J.C.R., R.S.J.E.), and Channing Laboratory (J.C.R.), Brigham and Women's Hospital; Harvard Medical School (G.M.H., O.E.Z., I.O.R., G.R.W.); the Department of Biostatistics, Boston University School of Public Health (W.G., J.D.); the Departments of Medicine and Neurology, Boston University Medical School (J.C.L.); and the Pulmonary Center, Department of Medicine, Boston University School of Medicine (G.T.O.) — all in Boston; the National Heart, Lung, and Blood Institute Framingham Heart Study, Framingham, MA (W.G., J.D., G.T.O.); the Pulmonary Center, Department of Medicine, University of Colorado (E.M., M.I.S., D.A.S.), and University of Colorado, Denver, School of Public Health (T.E.F.) — both in Denver; and the Department of Medicine, Vanderbilt University School of Medicine, Nashville (M.P.S., J.E.L.).

Supplementary Material

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Citing Articles (286)

    Figures/Media

    1. Figure 1. Computed Tomographic Images of Two Participants with Lung Abnormalities.
      Figure 1. Computed Tomographic Images of Two Participants with Lung Abnormalities.

      Shown are axial images (Panels A and B) and coronal images (Panels C and D) obtained from two participants in the Framingham Heart Study. Panels A and C (Participant 1) show representative features of interstitial lung abnormalities, and Panels B and D (Participant 2) show pulmonary parenchymal architectural distortion highly suggestive of a fibrotic lung disease (definite fibrosis).

    2. Table 1. Baseline Characteristics of the Participants, According to the Status of Interstitial Lung Abnormalities (ILA).
      Table 1. Baseline Characteristics of the Participants, According to the Status of Interstitial Lung Abnormalities (ILA).
    3. Figure 2. MUC5B Genotype According to Lung Abnormality Status and Age Group.
      Figure 2. MUC5B Genotype According to Lung Abnormality Status and Age Group.

      Data from 2633 participants from the Framingham Heart Study are shown according to the MUC5B promoter genotype (35705950 G/G, G/T, or T/T), stratified by lung abnormality status and age (less than or equal to 50 years vs. >50 years). CT denotes computed tomography, FHS-MDCT2 Framingham Heart Study Multidetector Computed Tomography 2, and ILA interstitial lung abnormalities.

    4. Table 2. Association between Interstitial Lung Abnormalities and MUC5B Genotype in the Framingham Heart Study.
      Table 2. Association between Interstitial Lung Abnormalities and MUC5B Genotype in the Framingham Heart Study.